Survival-associated meQTLs across different cancer types


We identified 23,432 meQTLs associated with patient overall survival across different cancer types at FDR < 0.05.


e.g., "BLCA"
e.g., "rs11600543"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
log-rank test p-value
Sample size
Median survival time AA
Median survival time Aa
Median survival time aa
Dispaly
SARC rs8047171 chr16:53372930 A/G 1.77E-11 258 4.27 31.57 32.3 KM Plot
SARC rs8060811 chr16:71436154 A/C 0 258 1.07 32.73 31.27 KM Plot
SARC rs8074451 chr17:45477573 C/T 3.13E-5 255 19.83 34.42 31.97 KM Plot
SARC rs8075058 chr17:45482857 A/G 8.85E-5 258 19.97 34 32.35 KM Plot
SARC rs8075843 chr17:45442363 C/T 2.72E-5 253 19.97 34 31.97 KM Plot
SARC rs8079142 chr17:45442049 G/A 2.72E-5 253 19.97 34 31.97 KM Plot
SARC rs8081556 chr17:45476149 G/C 6.54E-5 256 19.97 34 32.13 KM Plot
SARC rs8083461 chr18:57182434 G/A 3.38E-5 256 33.77 17.27 7.47 KM Plot
SARC rs9311199 chr3:38948028 A/G 1.18E-5 258 16.17 37.23 30.73 KM Plot
SARC rs9371555 chr6:150233381 G/A 8.5E-6 257 31.42 37.65 11.73 KM Plot
SARC rs9383942 chr6:150233350 A/C 8.5E-6 257 31.42 37.65 11.73 KM Plot
SARC rs9397071 chr6:150243614 A/G 1.56E-6 253 31.42 37.65 11.73 KM Plot
SARC rs953863 chr6:154622640 A/C 3.77E-15 248 31.77 28.33 1.17 KM Plot
SARC rs9552999 chr13:24141367 C/T 6.13E-5 254 33.2 30.73 13.52 KM Plot
SARC rs9553001 chr13:24143006 T/G 6.54E-5 255 32.9 30.73 13.52 KM Plot